Description

mageck count for functional genomics, reads are usually mapped to a specific sgRNA

Input

Name
Description
Pattern

0 ()

1 ()

library (file)

library file containing the sgRNA and gene name

*.{csv,txt,tsv}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

mageck Documentation

MAGeCK (Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout), an algorithm to process, QC, analyze and visualize CRISPR screening data.

doi: 10.1186/s13059-014-0554-4License: BSD License
Authors