Description

Evaluate microsattelite instability (MSI) using paired tumor-normal sequencing data

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

4 ()

5 ()

6 ()

Output

Name
Description
Pattern

output ()

output_dis ()

output_germline ()

output_somatic ()

versions ()

Tools

msisensor Documentation

MSIsensor is a C++ program to detect replication slippage variants at microsatellite regions, and differentiate them as somatic or germline.

doi: 10.1093/bioinformatics/btt755License: MIT
Authors