Description

Parse all the supporting reads of putative somatic SVs using nanomonsv. After successful completion, you will find supporting reads stratified by deletions, insertions, and rearrangements. A precursor to "nanomonsv get"

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

Output

Name
Description
Pattern

insertions ()

insertions_index ()

deletions ()

deletions_index ()

rearrangements ()

rearrangements_index ()

bp_info ()

bp_info_index ()

versions ()

Tools

nanomonsv Documentation

nanomonsv is a software for detecting somatic structural variations from paired (tumor and matched control) cancer genome sequence data.

https://github.com/friend1ws/nanomonsvdoi: 10.1101/2020.07.22.214262 License: GPL v3
Authors