Description

SARS-CoV-2 genome clade assignment, mutation calling, and sequence quality checks (C++ implementation)

Input

Name
Description
Pattern

0 ()

1 ()

dataset (directory)

Path containing the dataset files obtained by running nextclade dataset get

*

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

nextclade Documentation

SARS-CoV-2 genome clade assignment, mutation calling, and sequence quality checks

License: MIT
Authors