Description

An nf-core module for the OATK

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

2 ()

3 ()

4 ()

0 ()

1 ()

2 ()

3 ()

4 ()

Output

Name
Description
Pattern

mito_fasta ()

pltd_fasta ()

mito_bed ()

pltd_bed ()

mito_gfa ()

pltd_gfa ()

annot_mito_txt ()

annot_pltd_txt ()

clean_gfa ()

final_gfa ()

initial_gfa ()

multiplex_gfa ()

unzip_gfa ()

versions ()

Tools

oatk Documentation

An organelle genome assembly toolkit

doi: 10.5281/zenodo.10400173License: MIT
nf-core pipelines with this module
genomeassembly
Authors