Description

NVIDIA Clara Parabricks GPU-accelerated alignment, sorting, BQSR calculation, and duplicate marking. Note this nf-core module requires files to be copied into the working directory and not symlinked.

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

output_fmt (string)

Output format for the alignment. Options are 'bam' or 'cram'

{bam,cram}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

parabricks Documentation

NVIDIA Clara Parabricks GPU-accelerated genomics tools

License: custom
Authors