Description

NVIDIA Clara Parabricks GPU-accelerated minimap2 for aligning long read sequences against a large reference database using an accelerated KSW2 to convert FASTQ to BAM/CRAM.

Input

Name
Description
Pattern

0 ()

1 ()

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1 ()

0 ()

1 ()

0 ()

1 ()

output_fmt (string)

Output format for the alignment. Options are 'bam' or 'cram'

{bam,cram}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

parabricks Documentation

NVIDIA Clara Parabricks GPU-accelerated genomics tools

License: custom
Authors