Description

Parsnp is a command-line-tool for efficient microbial core genome alignment and SNP detection.

Input

Name
Description
Pattern

0 ()

1 ()

reference (file)

Reference genome in FASTA format

*.{fasta,fa,fna}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

parsnp Documentation

Parsnp is a command-line-tool for efficient microbial core genome alignment and SNP detection.

https://github.com/marbl/parsnpdoi: 10.1093/bioinformatics/btae311License: custom; see https://raw.githubusercontent.com/marbl/parsnp/master/LICENSE
Authors