Description

The PharmCAT Phenotyper is a core module of the Pharmacogenomics Clinical Annotation Tool that translates patient diplotypes into specific, actionable metabolizer phenotypes (e.g., Poor Metabolizer). It operates by analyzing the JSON output from the Named Allele Matcher, mapping these results to established clinical guidelines (such as CPIC) to predict drug response.

Input

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Output

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Tools

pharmcat Documentation

"PharmCAT (Pharmacogenomics Clinical Annotation Tool) is a bioinformatics tool that analyzes genetic variants to predict drug response and tailor medical treatment to an individual patient’s genetic profile."

https://github.com/PharmGKB/PharmCATdoi: 10.1002/cpt.928License: MPL-2.0
Authors