Description

phyloFlash is a pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.

Input

Name
Description
Pattern

0 ()

1 ()

silva_db (directory)

Folder containing SILVA database

univec_db (directory)

Folder containing UniVec database

UniVec

Output

Name
Description
Pattern

0 ()

0 ()

Tools

phyloflash Documentation

phyloFlash is a pipeline to rapidly reconstruct the SSU rRNAs and explore phylogenetic composition of an illumina (meta)genomic dataset.

https://github.com/HRGV/phyloFlashdoi: 10.1128/mSystems.00920-20License: GPL v3
Authors