Description

Produce a pruned subset of markers that are in approximate linkage equilibrium with each other. Pairs of variants in the current window with squared correlation greater than the threshold are noted and variants are greedily pruned from the window until no such pairs remain.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

0 ()

0 ()

0 ()

Output

Name
Description
Pattern

prunein ()

pruneout ()

versions ()

Tools

plink Documentation

Whole genome association analysis toolset, designed to perform a range of basic, large-scale analyses in a computationally efficient manner.

https://www.cog-genomics.org/plink/1.9/devLicense: GPL
Authors