Description

Calculate intervals coverage for each sample. N.B. the tool can not handle staging files with symlinks, stageInMode should be set to 'link'.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

intervals (file)

Annotated targets optimized for copy number calling

*.txt

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

purecn Documentation

Copy number calling and SNV classification using targeted short read sequencing