Description

Calculate coverage cutoffs to determine when to purge duplicated sequence.

Input

Name
Description
Pattern

0 ()

1 ()

Output

Name
Description
Pattern

cutoff ()

log ()

versions ()

Tools

purgedups Documentation

Purge_dups is a package used to purge haplotigs and overlaps in an assembly based on read depth

doi: 10.1093/bioinformatics/btaa025License: MIT
nf-core pipelines with this module
genomeassembly
Authors