Description

Generate a Micromeda file containing pathway annotations for one or more genomes. Supporting InterProScan and protein sequence information can also be optionally incorporated.

Input

Name
Description
Pattern

0 ()

1 ()

gp_txt (file)

Genome Properties flatfile (e.g. genomeProperties.txt) This file can be found on the original archived repository link below: https://raw.githubusercontent.com/ebi-pf-team/genome-properties/refs/heads/master/flatfiles/genomeProperties.txt

*.txt

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

pygenprop Documentation

A python library for programmatic usage of EBI InterPro Genome Properties.

https://github.com/Micromeda/pygenpropLicense: Apache-2.0
Authors