Description

Accurate and rapid RiboRNA sequences Detector based on deep learning

Input

Name
Description
Pattern

0 ()

1 ()

length (integer)

Sequencing read length (mean length). Note: the accuracy reduces for reads shorter than 40

integer >= 1

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

ribodetector Documentation

Accurate and rapid RiboRNA sequences detector based on deep learning. RiboDetector uses a deep learning approach to identify rRNA sequences in ribosome profiling (Ribo-seq) data. It can be used to filter out rRNA reads from Ribo-seq datasets, improving the quality of downstream analyses. As of version 0.3.1, Ribodetector doesn't support setting a random seed, so results may not be fully deterministic across runs.

doi: 10.1093/nar/gkac112License: GPL v3-or-later
Authors