Description

Calculate TIN (transcript integrity number) from RNA-seq reads

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

bed (file)

BED file containing the reference gene model

*.{bed}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

rseqc Documentation

RSeQC package provides a number of useful modules that can comprehensively evaluate high throughput sequence data especially RNA-seq data.

doi: 10.1093/bioinformatics/bts356License: GPL-3.0-or-later
Authors