Description

All-in-one RNA-seq post-alignment QC replacing dupRadar, featureCounts biotype QC, RSeQC, Preseq, Qualimap, and SAMtools stats

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Tools

rustqc Documentation

RustQC is a high-performance, Rust-based tool that replaces multiple post-alignment RNA-seq QC tools in a single pass over the BAM file. It produces output compatible with MultiQC for dupRadar, featureCounts biotype QC, RSeQC (bam_stat, infer_experiment, read_distribution, read_duplication, junction_annotation, junction_saturation, inner_distance, TIN), Preseq, Qualimap, and SAMtools (flagstat, idxstats, stats).

https://github.com/seqeralabs/rustqcLicense: GPL-3.0-or-later
Authors