Description

Calling lowest common ancestors from multi-mapped reads in SAM/BAM/CRAM files

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

database (file)

Directory containing the sam2lca database

*

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

Tools

sam2lca Documentation

Lowest Common Ancestor on SAM/BAM/CRAM alignment files

doi: 10.21105/joss.04360License: GPL v3
Authors