Description
Validate an Illumina SampleSheet.csv (V1 or V2) for index, adapter, and structural issues. Format is auto-detected. Exits 0 if valid, 1 if errors are found — causing the pipeline to fail early with a clear message rather than discovering demultiplexing problems downstream.
Tools
samplesheet-parser Documentation
Format-agnostic parser for Illumina SampleSheet.csv files. Supports IEM V1 (bcl2fastq) and BCLConvert V2 with auto-detection, bidirectional conversion, index validation, and Hamming distance checking.
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