Description

Computes the depth at each position or region.

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

Output

Name
Description
Pattern

tsv ()

versions ()

Tools

samtools Documentation

Tools for dealing with SAM, BAM and CRAM files; samtools depth – computes the read depth at each position or region

https://github.com/samtools/samtoolsdoi: 10.1093/bioinformatics/btp352License: MIT
nf-core pipelines with this module
ascc
Authors