Description

A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection

Input

Name
Description
Pattern

0 ()

1 ()

fasta (file)

Reference genome FASTA file used to construct Segemehl

*.{fa,fasta}

index (file)

Segemehl Index file from SEGEMEHL_INDEX

*.idx

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

segemehl Documentation

A multi-split mapping algorithm for circular RNA, splicing, trans-splicing and fusion detection

doi: 10.1186/gb-2014-15-2-r34License: GPL v3
Authors