Description

Use seqkit to find/replace strings within sequences and sequence headers

Input

Name
Description
Pattern

0 ()

1 ()

out_ext (string)

Output file extension. Leave empty to auto-detect from input (for example .fasta, .fasta.gz)

Output

Name
Description
Pattern

0 ()

0 ()

Tools

seqkit Documentation

Cross-platform and ultrafast toolkit for FASTA/Q file manipulation, written by Wei Shen.

https://github.com/shenwei356/seqkit/doi: 10.1371/journal.pone.016396
Authors