Description

Severus is a somatic structural variation (SV) caller for long reads (both PacBio and ONT)

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

4 ()

5 ()

0 ()

1 ()

Output

Name
Description
Pattern

log ()

read_qual ()

breakpoints_double ()

read_alignments ()

read_ids ()

collapsed_dup ()

loh ()

all_vcf ()

all_breakpoints_clusters_list ()

all_breakpoints_clusters ()

all_plots ()

somatic_vcf ()

somatic_breakpoints_clusters_list ()

somatic_breakpoints_clusters ()

somatic_plots ()

versions ()

Tools

severus Documentation

A tool for somatic structural variant calling using long reads

doi: 10.1101/2024.03.22.24304756License: BSD-3-clause
Authors