Description

Tool to phase rare variants onto a scaffold of common variants (output of phase_common / ligate). Require feature AVX2.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

4 ()

0 ()

1 ()

2 ()

3 ()

0 ()

1 ()

Output

Name
Description
Pattern

phased_variant ()

versions ()

Tools

shapeit5 Documentation

Fast and accurate method for estimation of haplotypes (phasing)

https://github.com/odelaneau/shapeit5doi: 10.1101/2022.10.19.512867 License: MIT
Authors