Description

simpleaf is a program to simplify and customize the running and configuration of single-cell processing with alevin-fry.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

1 ()

2 ()

0 ()

1 ()

2 ()

3 ()

resolution (string)

UMI resolution (https://alevin-fry.readthedocs.io/en/latest/quant.html). Possible values are 'cr-like', 'cr-like-em', 'parsimony', 'parsimony-em', 'parsimony-gene', and 'parsimony-gene-em'.

0 ()

1 ()

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

simpleaf Documentation

SimpleAF is a program to simplify and customize the running and configuration of single-cell processing with alevin-fry.

License: BSD-3-Clause
Authors