modules/
ska_distance

Calculate pairwise distances and basic clustering from SKA sketches

genomics metagenomics kmer split_kmers distance clustering

https://github.com/nf-core/modules/tree/master/modules/nf-core/ska/distance

Description

Calculate pairwise distances and basic clustering from SKA sketches

Input

Name

Description

Pattern

`0` ()

`1` ()

`2` ()

Output

Name

Description

Pattern

`0` ()

`0` ()

`0` ()

`0` ()

`0` ()

Tools

ska Documentation

SKA (Split Kmer Analysis)

https://github.com/simonrharris/SKAdoi: 10.1101/453142License: MIT

Authors

get in touch

Ask a question on Slack

Open an issue on GitHub

Paste this command into your terminal to download this module.