Description

Assemble microbial genomes from short-read FASTQ files into contigs in FASTA format using SKESA.

Input

Name
Description
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Output

Name
Description
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Tools

skesa Documentation

SKESA is a de-novo sequence read assembler for microbial genomes based on DeBruijn graphs.

https://github.com/ncbi/SKESAdoi: 10.1186/s13059-018-1540-zLicense: Public Domain
Authors