Core-SNP alignment from Snippy outputs
core alignment bacteria snippy
https://github.com/nf-core/modules/tree/master/modules/nf-core/snippy/core
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reference
Reference genome in GenBank (preferred) or FASTA format
*.{gbk,gbk.gz,gbff,gbff.gz,fa,fa.gz}
Rapid bacterial SNP calling and core genome alignments
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