Description

Core-SNP alignment from Snippy outputs

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

reference (file)

Reference genome in GenBank (preferred) or FASTA format

*.{gbk,gbk.gz,gbff,gbff.gz,fa,fa.gz}

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

snippy Documentation

Rapid bacterial SNP calling and core genome alignments

License: GPL v2
Authors