modules/
sourmash_sketch

Create a signature (a group of FracMinHash sketches) of a sequence using sourmash

hash sketch sourmash genomics metagenomics taxonomic classification taxonomic profiling kmer

https://github.com/nf-core/modules/tree/master/modules/nf-core/sourmash/sketch

Description

Create a signature (a group of FracMinHash sketches) of a sequence using sourmash

Input

Name

Description

Pattern

`0` ()

`1` ()

`merge_sigs` (boolean)

Specify whether to merge the signatures of all input files into a single signature file. Used e.g. for paired-end FASTQ inputs, or when there are multiple FASTAs for a single genome (such as chromosomes or contigs). Signature name will be set to the processes' '${prefix}'.