Description

Computational method for finding spa types.

Input

Name
Description
Pattern

0 ()

1 ()

repeats (file)

spa repeat sequences in FASTA format (Optional)

*.{fasta}

repeat_order (file)

spa types and order of repeats (Optional)

*.{txt}

Output

Name
Description
Pattern

0 ()

0 ()

Tools

spatyper Documentation

Computational method for finding spa types.

doi: 10.5281/zenodo.4063625License: LGPL v3
Authors