Description

Extract sequencing reads in FASTQ format from a given NCBI Sequence Read Archive (SRA).

Input

Name
Description
Pattern

0 ()

1 ()

ncbi_settings (file)

An NCBI user settings file.

*.mkfg

certificate (file)

Path to a JWT cart file used to access protected dbGAP data on SRA using the sra-toolkit

*.cart

Output

Name
Description
Pattern

0 ()

0 ()

Tools

sratools Documentation

SRA Toolkit and SDK from NCBI

https://github.com/ncbi/sra-toolsLicense: Public Domain
Authors