Description

Create a counts matrix for single-cell data using STARSolo, handling cell barcodes and UMI information.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

opt_whitelist (file)

Optional whitelist file

0 ()

1 ()

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

starsolo Documentation

Mapping, demultiplexing and quantification for single cell RNA-seq.

doi: 10.1101/2021.05.05.442755License: MIT
Authors