Description

Transcript assembly and quantification for RNA-Se

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

mode (string)

StringTie mode (long-read-assembly, mix-read-assembly, expression-estimation, nascent-aware-assembly).

annotation_gtf (file)

Annotation gtf file (optional).

.gtf

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

stringtie2 Documentation

Transcript assembly and quantification for RNA-Seq

License: MIT
Authors