Description

Align short reads using dynamic seed size with strobemers

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

sort_bam (boolean)

use samtools sort (true) or samtools view (false)

true or false

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

strobealign Documentation

Align short reads using dynamic seed size with strobemers

https://github.com/ksahlin/strobealigndoi: 10.1186/s13059-022-02831-7License: MIT
Authors