Description

Simulate an SV VCF file based on a reference genome

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

snp_mutation_frequency (float)

The SNP mutation frequency in the output VCF (0-1)

sim_reads (integer)

Whether or not to simulate reads (1==yes, else no)

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

survivor Documentation

Toolset for SV simulation, comparison and filtering

https://github.com/fritzsedlazeck/SURVIVORdoi: 10.1038/NCOMMS14061License: MIT
Authors