Description

Syri compares alignments between two chromosome-level assemblies and identifies synteny and structural rearrangements.

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

file_type (string)

Input file type which is one of T: Table, S: SAM, B: BAM, P: PAF

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

Tools

syri Documentation

Synteny and rearrangement identifier between whole-genome assemblies

doi: 10.1186/s13059-019-1911-0License: MIT License
Authors