Description

Aligns sequences using the regressive algorithm as implemented in the T_COFFEE package

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

2 ()

compress (boolean)

Flag representing whether the output MSA should be compressed. Set to true to enable/false to disable compression. Compression is done using pigz, and is multithreaded.

Output

Name
Description
Pattern

0 ()

0 ()

Tools

tcoffee Documentation

A collection of tools for Computing, Evaluating and Manipulating Multiple Alignments of DNA, RNA, Protein Sequences and Structures.

https://github.com/cbcrg/tcoffeedoi: 10.1038/s41587-019-0333-6License: GPL v3

pigz Documentation

Parallel implementation of the gzip algorithm.

Authors