Description

Create fasta consensus with TOPAS toolkit with options to penalize substitutions for typical DNA damage present in ancient DNA

Input

Name
Description
Pattern

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

0 ()

1 ()

0 ()

Output

Name
Description
Pattern

fasta ()

vcf ()

ccf ()

log ()

versions ()

Tools

topas Documentation

This toolkit allows the efficient manipulation of sequence data in various ways. It is organized into modules: The FASTA processing modules, the FASTQ processing modules, the GFF processing modules and the VCF processing modules.

https://github.com/subwaystation/TOPASdoi: 10.1038/s41598-017-17723-1License: CC-BY
Authors