Description
TransDecoder identifies candidate coding regions within transcript sequences. it is used to build gff file.
Tools
transdecoder Documentation
TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.
https://github.com/TransDecoder/TransDecoderLicense: Broad Institute