Description

TransDecoder identifies candidate coding regions within transcript sequences. it is used to build gff file.

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Tools

transdecoder Documentation

TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.

https://github.com/TransDecoder/TransDecoderLicense: Broad Institute
Authors