Description

TransDecoder identifies candidate coding regions within transcript sequences. It is used to build gff file. You can use this module after transdecoder_longorf

Input

Name
Description
Pattern

0 ()

1 ()

fold (directory)

Output from the module transdecoder_longorf

*

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

0 ()

Tools

transdecoder Documentation

TransDecoder identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.

https://github.com/TransDecoder/TransDecoderLicense: Broad Institute
Authors