Description

Given baseline and comparison sets of variants, calculate the recall/precision/f-measure

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

4 ()

5 ()

0 ()

1 ()

0 ()

1 ()

Output

Name
Description
Pattern

fn_vcf ()

fn_tbi ()

fp_vcf ()

fp_tbi ()

tp_base_vcf ()

tp_base_tbi ()

tp_comp_vcf ()

tp_comp_tbi ()

summary ()

versions ()

Tools

truvari Documentation

Structural variant comparison tool for VCFs

https://github.com/ACEnglish/truvaridoi: 10.1186/s13059-022-02840-6License: MIT
Authors