Description

Group reads based on their UMI and mapping coordinates

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

create_bam (boolean)

Whether or not to create a read group tagged BAM file.

get_group_info (boolean)

Whether or not to generate the flatfile describing the read groups, see docs for complete info of all columns

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

Tools

umi_tools Documentation

UMI-tools contains tools for dealing with Unique Molecular Identifiers (UMIs)/Random Molecular Tags (RMTs) and single cell RNA-Seq cell barcodes

Authors