Description

Call variants for a given scenario specified with the varlociraptor calling grammar, preprocessed by varlociraptor preprocessing

Input

Name
Description
Pattern

0 ()

1 ()

scenario (file)

Yaml file containing scenario information (optional)

*.{yml,yaml}

scenario_aliases (list)

List of aliases for the scenario (optional)

Output

Name
Description
Pattern

0 ()

0 ()

Tools

varlociraptor Documentation

Flexible, uncertainty-aware variant calling with parameter free filtration via FDR control.

https://github.com/varlociraptor/varlociraptordoi: 10.1186/s13059-020-01993-6License: GPL v3
Authors