Description

The module runs the segmentation algorithm on a specific tile using Vizgen's post-processing tool.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

3 ()

algorithm_json (file)

JSON file containing the algorithm parameters.

*.json

custom_weights (directory)

Directory containing custom weights for the segmentation algorithm. Must be defined in the algorithm JSON file under "custom_weights" as directory name only (not full path).

Output

Name
Description
Pattern

0 ()

0 ()

Tools

vizgenpostprocessing Documentation

Vizgen's post-processing tool

https://github.com/Vizgen/vizgen-postprocessingLicense: Apache-2.0
Authors