Description

The wham suite consists of two programs, wham and whamg. wham, the original tool, is a very sensitive method with a high false discovery rate. The second program, whamg, is more accurate and better suited for general structural variant (SV) discovery.

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

fasta (file)

Reference Fasta file

*.{fasta,fa}

fasta_fai (file)

Index of the reference Fasta

*.fai

Output

Name
Description
Pattern

0 ()

0 ()

0 ()

0 ()

Tools

whamg Documentation

Structural variant detection and association testing

doi: 10.1371/journal.pcbi.1004572License: MIT
Authors