Repository health
Check GitHub settings for all sanger-tol Nextflow pipelines repositories
Pipelines
| Pipeline Name |
Released | Released after tools | Main = release | JSON Schema | DSL2 | Wikis | Issues | Merge commits | Rebase merging | Squash merges | Default branch | Keywords | Description | Repo URL | Team access | Branches exist | Branch protection: main | Branch protection: dev |
| ascc |
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| blobtoolkit |
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| curationpretext |
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| ensemblgenedownload |
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| ensemblrepeatdownload |
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| genealignment |
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| genomeassembly |
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| genomenote |
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| insdcdownload |
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| metagenomeassembly |
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| nfmicrofinder |
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| readmapping |
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| sequencecomposition |
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| treeval |
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| variantcalling |
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| variantcomposition |
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| zippypretext |
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Core repos
| Pipeline Name |
Wikis | Issues | Merge commits | Rebase merging | Squash merges | Default branch | Keywords | Description | Repo URL | Team all | Team admin | main: exists |
| cobiontcheck |
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| gda |
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| nf-core-modules |
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| pipelines-website |
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