Description

Generate BlobTK plots from a provided Blobtoolkit Dataset

Input

Name
Description
Pattern

fasta (file)

Structure [ val(meta), path(reference) ] Meta is the Groovy Map containing sample information Reference is the fasta for analysis

btk_local_path (file)

Directory of local Blobtoolkit datasets to use for plotting

btk_online_path (string)

URL of online Blobtoolkit datasets to use for plotting

ch_blobtk_output_format (string,)

Output format for BlobTK plots (png or svg)

Output

Name
Description
Pattern

png_blobtk_images (file)

PNG images generated by BlobTK plots Structure: [ val(meta), path(pngs) ]

*.png

svg_blobtk_images (file)

SVG images generated by BlobTK plots Structure: [ val(meta), path(svg) ]

*.svg

Components

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