Description

Create a cooler from genomic pairs and bins

Input

Name
Description
Pattern

0 ()

1 ()

2 ()

0 ()

1 ()

mode (integer)

Input mode for cooler cload - one of pairs, pairix, tabix

cool_bin (integer)

Bins size in bp

Output

Name
Description
Pattern

0 ()

0 ()

Tools

cooler Documentation

Sparse binary format for genomic interaction matrices

https://github.com/open2c/coolerdoi: 10.1093/bioinformatics/btz540License: BSD-3-clause
nf-core pipelines with this module
genomeassemblygenomenotetreeval
Authors