Description

Generate a density file for a given feature type

Input

Name
Description
Pattern

intervals_file (file)

Structure [ val(meta), path(reference) ] Meta is the Groovy Map containing sample information Intervals file

ch_chrom_sizes (file)

Structure: [ val(meta), path(sizes) ] Input chromosome sizes file - a TSV with two columns, name and size.

Output

Name
Description
Pattern

density_file (file)

Structure: [ val(meta), path(density_file) ] Bigwig file containing density graph

density_tabix (file)

Structure: [ val(meta), path(density_tabix) ] Tabix index for the density .bed file

Components

Command copied!