sanger-tol/
variantcalling

This Nextflow DSL2 pipeline calls variants on long read alignment. It is run after sanger-tol/readmapping in the Sanger ToL production suite but with options to run on unaligned reads.

Version history

1.1.3

5 months ago

Released 24 May 2024 — 8025881

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1.1.2

7 months ago

Released 14 Mar 2024 — e5e15d7

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1.1.1

8 months ago

Released 2 Feb 2024 — aa65ad5

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1.1.0

10 months ago

Released 20 Dec 2023 — 15a1475

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1.0.0

1 year ago

Released 3 May 2023 — 0a65618

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Pipeline Statistics

Stars

Forks

133

Commits

Code contributors

Repository traffic

SVG / Reset zoom Git clones

1.68K
Clones since June 2023

351
Unique clones since June 2023

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3.81K
Views since June 2023

442
Unique visitors since June 2023

Contributors

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Run with

Read how to configure the Seqera Platform CLI here.

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1679

stars

watchers

last release

5 months ago

last updated

4 months ago

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sanger-tol/variantcalling

Version history

Pipeline Statistics

Repository traffic

Contributors

Run with

clones in last 1 year

stars

watchers

last release

last updated

open issues

open pull requests

collaborators

get in touch

sanger-tol/
variantcalling